Electrophoresis

Electrophoresis is a technique which separates charged biomolecules based on the rate at which they migrate in an applied electrical field. In many cases, electrophoreses of proteins are performed using polyacrylamide gel electrophoresis (PAGE)1). For molecular weight estimation and purity determination of proteins, sodium dodecyl sulfate (SDS)-PAGE is commonly used. SDS is a strongly anionic detergent and is added to samples, gels, and electrodes buffer solutions. SDS denatures and binds to proteins. When used in conjunction with reducing reagents such as 2-mercaptoethanol, dithiothreitol etc. to cleave disulfide bonds, the amount of SDS bound is almost always proportional to the molecular weight of the polypeptide. Therefore, the migration of the denatured polypeptide is independent of its sequence.
Laemmli’s method is the most widely used system of SDS-PAGE2). In this method, the separation and the stacking gel contain Tris-HCl and the upper and lower buffer reservoirs contain Tris-glycine. All components of the system contain SDS. The advantage of Laemmli’s method is that it gives sharper bands in the final plate.1)

[SDS-PAGE according to the method of Laemmli.]

Marker proteins run on 7.5% gel and visualized with Ag-staining.

Lane 1: 250 ng
Lane 2: 62.5 ng
Lane 3: 16 ng
Lane 4: 4 ng
Lane 5: 0 ng

M1948 M1948 A2097 A2097 A1132 A1132
A2098 A2098 B3195 B3195 B3193 B3193
B3194 B3194 D3647 D3647 G0316 G0316
G0317 G0317 M0506 M0506 T2515 T2515
S0588 S0588 T2516 T2516
M1948 2-Mercaptoethanol [for Electrophoresis]
A2097 Acid Black 1 [for Electrophoresis]
A1132 Acrylamide Monomer [for Electrophoresis]
A2098 Ammonium Peroxodisulfate [for Electrophoresis]
B3195 Bromophenol Blue Sodium Salt [for Electrophoresis]
B3193 Coomassie Brilliant Blue G-250 [for Electrophoresis]
B3194 Coomassie Brilliant Blue R-250 [for Electrophoresis]
D3647 DL-Dithiothreitol [for Electrophoresis]
G0316 Glycerol [for Electrophoresis]
G0317 Glycine [for Electrophoresis]
M0506 N,N'-Methylenebisacrylamide [for Electrophoresis]
T2515 N,N,N',N'-Tetramethylethylenediamine [for Electrophoresis]
S0588 Sodium Dodecyl Sulfate [for Electrophoresis]
T2516 Tris(hydroxymethyl)aminomethane [for Electrophoresis]

Literature

1) J. Sambrook, D. W. Russell, "Molecular Cloning, A LABORATORY MANUAL (3rd edition)", Cold Spring Harbor Laboratory Press (2001).
2) U. K. Laemmli, Nature, 1970, 227, 680.


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